CDS
| Accession Number | TCMCG057C26671 |
| gbkey | CDS |
| Protein Id | XP_018492193.1 |
| Location | join(29821792..29821851,29821969..29822056,29822143..29822954,29823047..29823247,29823365..29823475,29823750..29824177,29824256..29824364,29824450..29824530,29824603..29824775,29824913..29825038,29825240..29825401,29825496..29825553,29825823..29826053,29826174..29826320,29826420..29826980,29827080..29827340,29827414..29827521,29827607..29827701,29827788..29827944,29828112..29828321,29828437..29828598,29828793..29829008) |
| Gene | LOC108862532 |
| GeneID | 108862532 |
| Organism | Raphanus sativus |
Protein
| Length | 1518aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018636691.1 |
| Definition | PREDICTED: DNA helicase INO80 isoform X1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | DNA helicase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11665
[VIEW IN KEGG] |
| EC |
3.6.4.12
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGATCCTTCGAGAAGGCAATTGAAGGACTCGCGTTACGCTAATCTCTTCGATCTCGAGCCGTTGATGAACTTCAGGATCCCGAGACATGAAGATGAGACTGATTACTATGGGAGTAGTAGCCAGGATGAAACTAGAGGCAATCAAGGTGGGTTAGTAGCAAACTACGGCAACGGTGTTAAACCGGGGATGAATTCGAGTGCCAAGAAGAGAAAGCGGTGGACAGAGGTTGATGATGATGTAGAGGATGGTGATGATCATAACTACAGTCGACATGTTACCGAGGAGCATTACAGAGCAATGCTTGGGGAGCATGTGCAAAGATTCAAAAGTAGGTCCAGGGAGTCTCGAGGGAATCACGCGCCTCTGTTGGGTGTTCCGGTGCGTAATAAGAGCAATGTGGGCATTAACAGAGGTAGGAACGATCACCACAGGAGATTCTATGACGTGGACACCTCCTCGAATTTTGCTGCTGATGGGATTCCACAAAGGCGTGGAAGCTATCGTGAATCCAATATTACCCCCAAAGTAGCATATGAGCCTTCGTATTTGGATATTGGGGAAGGTGTTGTCTACAAAATCCCTCCGAGTTATGACAAGCTGGTGGCGTCATTAAACTTACCAAGCTTTTCAGATATTCATGTGGACGATTTCTACTTGAAAGGAGCTCTGGATCTGAGATCATTAGCTGAGCTGATGGCTAGGGATAAAAGGTCTGGAGCTAGAAGCCGTAATGGAATGGGTGAGCCTCGACCTCAGTATGATTCACTTCAAGCTAGAGTGAAGGCCTTGTCAGCTTCAAACTCCAGCCCTAACTTCAGCCTCAAGGTGTCAGAAGATGCAATGAACTCTGTCATCCCAGAAGGAGCTGCTGGAACTACTGCACGGACAATACTATCAGAGGGTGGTGTTTTACAGGTCCATTACGTCAAGGTTCTTGAGAAGGGGGATACATATGAGATTGTTCAACGAAGTCTGCCTAAGAAGCTGAAGGTAAAGAATGATCCTGCAGTAATTGAAAAGGCAGAAAGGGACAAGATTCGAAAAGTTTGGATCAACATTGTCAGAAGAGATATACCAAAACACCATAGAGTTTTCACAACGTTTCATCGGAAACAATCAATTGATGCCAAAAGGTTTGCAGATGGTTGCCAACGAGAGGTGAGGATGAAGGTGGCCAGATCATTCAAACTGCCAAGGAGTGCACCAATTCGCACCAGGAAGATATCCAGAGACATGCTGCTATTCTGGAAGCGCTATGACAAGCAGATGGCCGAAGAGAGGAAAAAACAGGAAAAGGAAGCGGCAGAGGCATTAAAACGTGAACAGGAGCTTCGAGAGGCACAAAGGCAGCAACAGAGGCTTAATTTTCTTATTAAACAGACTGAACTTTACAGTCACTTCATGCAAAACAAAACCGATGCAATGCCTTCCGAACCCCTGCCGATAGGAGATGAAAATCTGGCTGACAAAGTAATCCTGGAACCTTCAGCAGCAAAACTTTCTGAGGTGGAGGATCCTGAAGTTGCTAAAATGAAGGAAGATGCCCTGAAGGCTGCTCGAGAGGCAGTGTCAAAGCAGAGAAAAATAACAGATGCATTTGACACTGAATATATGAAGCTACAGCAACCTTCTGACATGGAAGGACCATCAATTGATGTCTCAGTCTCGGGCTCGGGCAATATAGACTTACATAACCCATCTACAATGCCTGTCACATCAACAGTTCAGACTCCAGAAATGTTTAAAGGAACTCTAAAGGAATACCAAATGAAAGGCCTTCAGTGGCTAGTGAATTGTTATGAGCAGGGTTTGAATGGCATTCTTGCGGATGAAATGGGCTTGGGTAAGACTATTCAAGCTATGGCGTTCTTGGCACATTTGGCTGAGGAAAAAAACATTTGGGGTCCATTTCTTGTTGTTGCCCCTGCTTCTGTTCTTAACAATTGGGCTGATGAGATTAGTCGTTTCTGTCCTGACTTGAAAACTCTTCCGTATTGGGGAGGGTTACAAGAACGGACAATTTTACGAAAGAATATCAATCCCAAGCGTATGTACCGAAGGGATGCTGGTTTTCATATTTTAATTACCAGCTATCAGCTATTAGTAACTGATGAAAAGTATTTTCGCCGGGTGAAGTGGCAGTATATGGTACTAGATGAGGCCCAAGCAATCAAAAGTTCCACAAGTATAAGATGGAAGACCCTGCTTAGTTTCAACTGTCGGAACCGATTGCTTCTGACTGGTACTCCAATTCAGAATAACATGGCGGAGTTATGGGCCTTGCTGCACTTCATCATGCCAATGGTGTTTGACAGCCATGAACAATTTAATGAGTGGTTCTCAAAAGGAATCGAGAATCATGCTGAACATGGAGGCACTTTAAACGAGCACCAGCTTAACAGACTGCATGCAATATTAAAGCCATTCATGCTGCGACGTGTCAAAAAGGATGTGGTTTCTGAGCTAACTACAAAGACGGAAGTTACAGTACACTGCAAGCTCAGTTCTCGACAACAAGCTTTCTATCAGGCTATCAAGAACAAAATTTCTCTGGCTGAGTTGTTTGACAGCAACCGTGGGCATTTTAATGAAAAGAAAATATTGAATCTGATGAATATCGTCATTCAACTTAGAAAGGTTTGCAACCATCCAGAGTTGTTCGAAAGGAATGAAGGGAGCTCGTATCTCTACTTTGGAGTGATGTCCAATTCCCTTTTACCCCCTCCCTTTGGTGAGCTAGAGGATGTACACTATTCTGGTGGTCAAAATCCCATAACATACAAGATACCTAAACTCCTAGAGAAAGAAATGCTCCAAAACTCTGAAACGTTTTGCTCTTCTATCGGGAAGGGCTTATCAAGAGAATCCTTTCTGAAGCATTTTAATATATTTTCACCAGAGTATATTCATAGGTCAACACTCCCATCTGATGGTAGCGTAGATCAAGCAGTTAGTGGAAGTGGAGCATTTGGCTTTTCCCGTTTGATGGATTTATCACCATCAGAAGTTGGATATCTGGCTTTGTGCTCCGTCATGGAAAGGCTATTATTCTCTATACTGAAATGGGAGCGGCAATTCTTGGATGAAATAGTAGACTCTTTTATGGAATTCACAGATGATGATCTTAATGGAGATAACATCACAAGAGTTAAAACCAGAGCTGTCACAAGAATGTTGTTGATGCCATCAAAAGTTGAAACGAGTTTGCTGAAAGGGAAAGTCAGCACAGGCCCTACCTGTCACTCATTTGAATCTCTAGTGATCTCTCATCAGGATAGGCTACTTTCAAATATCAAACTCCTACACTCTGCGTATACGTTTATCCCCAAAGCCAGAGCTCCACCGGTAAGCGTTCATTGCTCGGACAGAAACTCTGCATACAGAATTACAGAGGAAATGCACCAACCATGGCTGAAGAGACTATTAATCGGATTTGCACGAACCTCTGAAGCTAATGGGCCAAGGAAGCCGAGCAGCCTTCCACATCCTTTAATCCAAGAAATTGACTCAGAACTTCCAGTTGTGCAACCTGCGCTTCAACTGACGCACAGAATATTTGGTTCTTGCCCTCCAATGCAAAGTTTTGACCCTGCAAAGTTGCTCACGGACTCTGGGAAGCTGCAGACACTTGATATATTATTGAAGCGGCTTAGAGCTGGAAATCACAGGGTGCTCCTCTTTGCACAAATGACAAAGATGCTGAATATTCTCGAGGATTACATGAACTATAGAAAGTACAAGTACCTCAGGCTTGATGGATCCTCCACCATCATGGATCGCCGAGATATGGTTAGGGATTTTCAGCAAAGGAGCGATATTTTTGTGTTCTTGCTGAGCACTAGAGCTGGAGGACTTGGTATCAACTTGACTGCTGCTGACACAGTCATATTCTATGAAAGTGATTGGAATCCCACCTTGGATTTACAAGCTATGGACAGAGCTCATCGTCTTGGTCAAACAAAAGATGTTACTGTTTATCGGCTCATCTGCAAGGAAACAGTGGAAGAGAAAATATTGCACAGAGCCAGTCAGAAAAATACAGTTCAACAGCTTGTAATGACAGGAGGTCATGTACAGGGTGATGATGTTTTTGGAACTGCGGATGTGGTATCGTTGCTTATGGATGATGCAGAGGCAGCACAACTAGAGCAGAAATTCAGAGAACTACCATTACAGGTAAAGGACAGGCAGAAGAAAAAACAGCCAATGAAACGAATCAGAATAGATGCTGAAGGAGATGCAGCTTTGGAAGAGTTGGATGATGCTACCGAACGTCAGGATAATGGGGAGGAACCTGCTGACCAAGAACCGGAAAATACAAAACCTAGTAACAAAAAGAGGAAGGCTGCGTCAACTCCGAGAGCTAGAGTTCCTCAGAAAGCAAAGGAAGACGAGAATGGTGAAGGAGATGATACTCCTCTTCAGCCTCAGAGAACAAAAAGAGTAAAGAGACAAACAAAGAGCATAAACGAGTCTCTTGAACCTGTCTTCTCTGCATCAGTTACTCCAACAAATGGAGATTTCAACCCAAGTACCTCTAATGCAGATGGTTAA |
| Protein: MDPSRRQLKDSRYANLFDLEPLMNFRIPRHEDETDYYGSSSQDETRGNQGGLVANYGNGVKPGMNSSAKKRKRWTEVDDDVEDGDDHNYSRHVTEEHYRAMLGEHVQRFKSRSRESRGNHAPLLGVPVRNKSNVGINRGRNDHHRRFYDVDTSSNFAADGIPQRRGSYRESNITPKVAYEPSYLDIGEGVVYKIPPSYDKLVASLNLPSFSDIHVDDFYLKGALDLRSLAELMARDKRSGARSRNGMGEPRPQYDSLQARVKALSASNSSPNFSLKVSEDAMNSVIPEGAAGTTARTILSEGGVLQVHYVKVLEKGDTYEIVQRSLPKKLKVKNDPAVIEKAERDKIRKVWINIVRRDIPKHHRVFTTFHRKQSIDAKRFADGCQREVRMKVARSFKLPRSAPIRTRKISRDMLLFWKRYDKQMAEERKKQEKEAAEALKREQELREAQRQQQRLNFLIKQTELYSHFMQNKTDAMPSEPLPIGDENLADKVILEPSAAKLSEVEDPEVAKMKEDALKAAREAVSKQRKITDAFDTEYMKLQQPSDMEGPSIDVSVSGSGNIDLHNPSTMPVTSTVQTPEMFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSTSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMVFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGHFNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYLYFGVMSNSLLPPPFGELEDVHYSGGQNPITYKIPKLLEKEMLQNSETFCSSIGKGLSRESFLKHFNIFSPEYIHRSTLPSDGSVDQAVSGSGAFGFSRLMDLSPSEVGYLALCSVMERLLFSILKWERQFLDEIVDSFMEFTDDDLNGDNITRVKTRAVTRMLLMPSKVETSLLKGKVSTGPTCHSFESLVISHQDRLLSNIKLLHSAYTFIPKARAPPVSVHCSDRNSAYRITEEMHQPWLKRLLIGFARTSEANGPRKPSSLPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQQRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDVFGTADVVSLLMDDAEAAQLEQKFRELPLQVKDRQKKKQPMKRIRIDAEGDAALEELDDATERQDNGEEPADQEPENTKPSNKKRKAASTPRARVPQKAKEDENGEGDDTPLQPQRTKRVKRQTKSINESLEPVFSASVTPTNGDFNPSTSNADG |